Student Fellows Explore Machine Learning with UCSF Industry Documents Library and Data Science Initiative

The UCSF Industry Documents Library (IDL) and Data Science Initiative (DSI) teams are excited to be working with three Data Science Fellows this summer. The Data Science Fellows are part of a joint IDL-DSI project to explore machine learning technologies to create and enhance descriptive metadata for thousands of audio and video recordings in IDL’s archival collections.  This year’s summer program includes two junior fellows and one senior fellow.

Our junior fellows are tasked with manually assigning or improving metadata fields such as title, description, subject, and runtime for a selection of videos in IDL’s collection on the Internet Archive. This is a detailed and time-consuming task, which would be costly to perform for the entire collection. In contrast, our senior fellow is using transcriptions of the videos, which we have generated with Google’s AutoML tool, to explore different technologies to automatically extract the descriptive information. We’ll then compare the human-generated data with the machine-generated data to assess accuracy.  The hope is that IDL can develop a workflow for using machine learning to create or improve metadata for many other videos in our collections.

Our Junior Data Science Fellows are Bryce Quintos and Adam Silva. Bryce and Adam are both participating in the San Francisco Unified School District (SFUSD) Career Pathway Summer Fellowship Program. This six-week program provides opportunities for high school students to gain work experience in a variety of industries and to expand their learning and skills outside of the classroom. Bryce and Adam are learning about programming and creating transcription for selected audiovisual materials. The IDL thanks SFUSD and its partners for running this program and providing sponsorship support for our fellows.

Noel Salmeron is our Senior Data Science Fellow participating in Life Science Cares Bay Area’s Project Onramp. Noel is using automated transcription tools to extract text from audiovisual files, run sentiment and topic analyses, and compare automated results to human transcription. Noel also provides guidance and mentoring to the Junior Fellows.

Our Fellows have shared a bit about themselves below. Please join us in recognizing Bryce, Adam, and Noel for their contributions to the UCSF Library this summer!

IDL-DSI Junior Data Science Fellow Bryce Quintos

Hi everyone! My name is Bryce Quintos and I am an incoming freshman at Boston University. I
hope to major in biochemistry and work in the biotechnology and pharmaceutical field. As someone who is interested in medical research and science, I am incredibly honored for the opportunity to help organize the Industry Documents Library at UCSF this summer and learn more about computer programming. I can’t wait to meet all of you!

IDL-DSI Junior Data Science Fellow Adam Silva

Hi, my name is Adam Silva and I am a Junior Intern for the UCSF Library. Currently, I am 17 years old and I am going into my senior year at Abraham Lincoln High School in San Francisco. I am part of Lincoln High School’s Dragon Boat team and I am also a part of Boy Scout Troop 15 in San Francisco. My favorite activities include cooking, camping, hiking, and backpacking. My favorite thing that I did in Boy Scouts was backpacking through Rae Lakes for a week. I am excited to work as a Junior Intern this year because working online rather than in person is new to me. I look forward to working with other employees and gaining the experience of working in a group.

IDL-DSI Senior Data Science Fellow Noel Salmeron

My name is Noel Salmeron and I am a third-year data science major and education minor at UC Berkeley. I’m excited to work with everyone this summer and looking forward to contributing to the Industry Documents Library!

Welcome Dick Fine Papers intern Lupe Samano!

Please join us in giving a warm welcome to our new intern, Lupe Samano!

Lupe will be working on processing the Dick Fine Papers (MSS 2022-02). UCSF physician Dr. Richard H. Fine (1940 – 2015) worked at the San Francisco General Hospital and Trauma Center, where he served as chief of the adult health center for 25 years and helped found a primary care residency program to train doctors to work with poor and vulnerable patients. The collection contains yearbooks, appointment books, correspondence, clippings, audio/visual material, photographs, and ephemera.

Dick Fine Papers Intern Lupe Samano

Lupe has provided her introduction below:

Hello, my name is Lupe and I recently completed the MLIS program at San Jose State University. I moved to San Francisco in 2013 to attend San Francisco State University where I earned my BA in Philosophy and Religion. The past 6-ish years I worked with kids but didn’t find it in me to pursue teaching. During the COVID pandemic, my program organized a small library cohort, and the librarians there convinced me to pursue a degree in MLIS. I enrolled in the program shortly after and discovered that my true passion lies in archives.

I had the privilege of interning for NPS at the Presidio Park Archives and Record Center where I had a great time learning and exploring about not just archives but the history of San Francisco. I am thrilled for this opportunity to further expand my knowledge of the city’s history and gain more hands-on experience in archival work.

In my free time, I enjoy thrifting, hiking, watching my dog frolic on the beach, and starting coloring pages that I never seem to finish.

Welcome to Summer Interns May Yuan and Lianne de Leon!

Please join us in giving a warm welcome to our two newest summer interns, May Yuan and Lianne de Leon!

May and Lianne are both participating in the San Francisco Unified School District (SFUSD) Career Pathway Summer Fellowship Program. This six-week program provides opportunities for high school students to gain work experience in a variety of industries and to expand their learning and skills outside of the classroom. Lianne and May will be working (remotely) with the UCSF Industry Documents Library (IDL), and we are grateful to SFUSD and its partners for sponsoring these internships.

May and Lianne will be working on several collection description projects with IDL this summer, including correcting and enhancing document metadata, and creating descriptions for audio-visual materials. They have provided their introductions below.

My name is May Yuan and I’m a junior at Raoul Wallenberg Traditional High School. During my free time, I enjoy reading, learning and trying new things, and helping others academically. I’m super excited to work here at the UCSF IDL to help provide valuable information to the public as well as learn more about the various documents, lawsuits, etc. myself; I also hope to enhance my productivity and organization skills during my time working here as these skills are crucial to college and everyday life in general. The career paths I’m interested in are bioengineering (bioinformatics/biostatistics), law, and finance.

IDL Summer Intern May Yuan

Hi, my name is Lianne R. de Leon. I am a part of the Class of 2023 at Phillip and Sala Burton High School. In the past, I have worked on VEX EDR Robotics competition in 2018-2019. In my spare time I enjoy trying new foods and yoga. I aspire to become a computer hardware engineer and to travel across the entirety of Asia. I look forward to meeting and working with you all.

IDL Summer Intern Lianne de Leon

Welcome to IDL Summer Intern, Khushi Bhat

Please join us in giving a warm welcome to Khushi Bhat, who will be conducting a remote internship with the UCSF Industry Documents Library (IDL) this summer.

Khushi is currently a rising senior at Rutgers University where she is majoring in Biotechnology and minoring in Computer Science. This summer, she is working in the Industry Documents Library researching tools and methods to extract geographic locations from a collection of documents related to the tobacco industry’s influence in public policy.

Khushi will be conducting an independent course project to help the IDL team enhance descriptive metadata for our industry documents collections. We have long been aware of a research need to be able to filter documents by geographic location. Tobacco control researchers and other public health experts at UCSF and around the world use the documents in the Industry Documents Library to understand how corporations impact public health. This research is often used to inform policymakers who write laws and policies regulating the sale and use of products such as tobacco. Researchers and policymakers need information which relates to their local area such as their city, county, state, or country.

Geographic location is not currently included in IDL’s document-level metadata, and since IDL contains more than 15 million documents it is not feasible to manually catalog this information.

Khushi’s work will focus on researching Natural Language Processing (NLP) and Named Entity Recognition (NER) text analysis methods. She will investigate available tools which have the potential to automatically identify and label geographic information in text. Khushi’s research, recommendations, and pilot testing will help the IDL team outline workflows and strategies for enhancing our document metadata to include geographic information.

Khushi aspires to pursue a career in bioinformatics in the future and intends on pursuing higher education in this field upon graduation. In her spare time, Khushi enjoys dancing, baking, and hiking. Prior to joining Rutgers, she was an avid Taekwondo practitioner (and has a 2nd degree black belt to show for it!)

Image of IDL intern Khushi Bhat
IDL Summer Intern Khushi Bhat

Highlighting the work of Freeman Bradley, of UCSF’s Research Development Department and the Black Caucus

By Shannon Foley, Archives & Special Collections Intern

Brought to Light wants to bring attention to remarkable former UCSF faculty member Freeman Bradley. His significant contributions to the medical community and the Black community at UCSF deserve to be recognized. Bradley grew up in Alabama, and after high school, he continued his education at Howard University in Washington D.C., where he received his bachelor’s degree in Biology. After his graduation, Bradley moved to Maryland and started working at the National Institute of Health, where he remained for four years before starting his career at UCSF. His position was with the Cardiovascular Research Institute, where he conducted research about respiratory changes associated with various anesthesias.

During his time at UCSF, Freeman Bradley worked as a technician to Dr. John Severinghaus and and Bradley’s contributions were fundamental to Severinghaus’s groundbreaking work. From 1957 to 1958, Dr. Severinghaus and Mr. Bradley combined technology created by Richard Stow and Leland Clark to create the first blood gas analysis system. Shortly after the first system was created, they were commercialized and proved revolutionary in health care. In Dr. Severinghaus’s written account of his research and the evolution of the invention of the blood gas analysis system, he emphasizes how his and Mr. Bradley’s invention changed medicine. By the 1960s they blood gas analysis systems were widely available, and and these tests provided essential information about a patient’s illness.. These systems are still used today, and in 1985 Dr. Severinghaus donated the first apparatus he and Mr. Bradley worked on at the Smithsonian Museum. In 1977 after his research with Dr. Severinghaus, Mr. Bradley was appointed Director of Development and Research. In this position, he helped progress the technology and development of medical tools. One of the other advancements he made at his time at UCSF was in the transportation technology of newborn babies or neonates. His contributions to medical advancements do not go unnoticed. 

Image taken from SYNAPSE – THE UCSF STUDENT NEWSPAPER, VOLUME 27, NUMBER 19, 24 FEBRUARY 1983, https://synapse.library.ucsf.edu/?a=d&d=ucsf19830224-01.1.3.

Freeman Bradley was not only an incredible asset to advancing medical research, but he also was an active member in UCSF’s Black Caucus. The Black Caucus is a club at UCSF whose mission statement is “The Black Caucus is a forum open to all Black-identified individuals and allies on this campus. Here they may openly express themselves regarding matters of race as they affect life on the campus and in the community. The Black Caucus serves as an instrument for the formation of a Black consensus on those racial matters that affect every person on this campus. This consensus will then be presented to the Administration for appropriate action.” One of the founding members and President of the Black Caucus, David Johnson, worked to create this community where Black members of UCSF could have their needs and concerns met. During Freeman Bradley’s time at UCSF and as an active member of the Black Caucus and used his calm temperament to make sure issues could be addressed and changes made. Mr. Bradley is quoted saying that even though he was criticized for staying diplomatic, he knew that it was the way to be more successful in the long run. In a 1983 interview of Mr. Bradley printed by Synapse, he shared his concerns with the lack of Black role models for youths in the sciences. He believes that minorities would be more likely to become a part of the medical field with more role models. Freeman Bradley is the perfect example of a role model to the youth and can be seen as an inspiration to all.

Works Cited:

“David Johnson, Freeman Bradley – Black Caucus Leaders.” Synapse, Volume 27, Number 19, 24 February 1983, synapse.library.ucsf.edu/?a=d&d=ucsf19830224-01.1.3, accessed April 21, 2021.

Severinghaus, John W. “The Invention and Development of Blood Gas Analysis Apparatus.” Anesthesiology, vol. 97, no. 1, 2002, pp. 253–256., doi:10.1097/00000542-200207000-00031, accessed April 21, 2021.

New Archives Intern – Shannon Foley

Please join us in welcoming our new intern, Shannon Foley. She’ll be working with us on writing and researching blog posts, as well as working on part 2 of our legacy finding aid project.

“Hello, My name is Shannon Foley. I am incredibly excited to be interning at UCSF’s
Archives & Special Collections this semester. I am currently in my last semester at the University of
San Francisco and will be graduating with a degree in Art History and Museum Studies.
Last semester I interned at the University of San Francisco’s Thacher Gallery. I helped
with their online exhibitions, a great experience learning how to navigate fully online
exhibitions.
At the University of San Francisco, the Art History and Museum Studies program offers
a diverse range of skills and experiences that I am excited to bring these skills to this
internship.
I grew up just an hour north of San Francisco in Sonoma County but have enjoyed
living in San Francisco for the past few years. When I am not in a class, I love to cook
and bake for my friends and family. I have also played tennis for the past ten years and
have enjoyed playing more during the pandemic. I am very passionate about traveling
and visiting museums abroad and locally.
On any given day, I can be seen walking my dog Louie and reading a good book.”

Sue Rochman Papers

This is a post from intern Harold Hardin, working on the NEH grant-funded project The San Francisco Bay Area’s Response to the AIDS Epidemic.

Sue Rochman papers, GLBTHS 2005-13 miscellaneous research papers
Sue Rochman papers, GLBTHS 2005-13 miscellaneous research papers

The Sue Rochman Papers (Collection 2005-13 at the GLBT Historical Society) contain critical information regarding the systematic oppression of incarcerated people living with HIV/AIDS in the first decade of the epidemic. The collection at just over 350 pages consists of interviews, newspaper clippings, and often most compellingly, correspondence from incarcerated people living with HIV/AIDS. Given the ongoing wave of HIV criminalization (a recent famous example being the case of Michael Johnson, who, incidentally, was released this month after spending five-years of a thirty-year sentence in Missouri, for allegedly seroconverting several partners with HIV without revealing his HIV-positive status) Micheal Johnson and Greg’s Smith’s cases  among others were rallying cries for HIV/AIDS activists bringing to our collective attention the ongoing histories of HIV criminalization. It is particularly important to look back at the particular ways in which this stigmatization of people living with HIV/AIDS began within the prison system and consider an early case of which the Sue Rochman Papers document. In this way, we can further contextualize our current historical moment in regards to the continuing criminalization of people living with HIV/AIDS–particularly the ways in which black gay men are overwhelmingly impacted by this deleterious trend.
            The correspondence between Ms. Rochman and various incarcerated people in several different prison locations (Attica prison in New York, Chino prison in California among others) echo similar findings. The correspondence notes the systematic way in which prison officials valued “security” to the detriment of the lives of incarcerated people living with HIV/AIDS. Confidentiality rights regarding seroconversion status were routinely trampled and ignored at the behest of prison officials. There was little to no basic health information regarding the spread of the disease. Incarcerated people with HIV/AIDS were often isolated in poor conditions, with little medical attention by qualified specialists in HIV/AIDS. The widespread abuse of incarcerated people with HIV/AIDS by prison guards themselves was also well documented. Having the disease in prison not only meant living in such conditions but additionally meant being socially ostracized through officially sanctioned segregation–barred from participation in vocational programs, college classes, and not allowed to have family visits. A jail in Fort Worth, Texas went as far as mandating LGB incarcerated populations wear colored wrist bands to identify their sexual orientation from afar. From such systematic forms of discrimination it is unsurprising then that HIV criminalization was birthed in such an environment.
            The Rochman papers document the case of Greg Smith who in 1990 was convicted of attempted murder, assault and terroristic threats. Charges were filed after he allegedly bit and spat on a guard in a New Jersey jail in 1989. He maintained his innocence throughout the trial famously saying after his sentence was read, ‘I never bit an officer, and I’ll say that until the day I die. I may die in the next year or two, but I’ll die proud. I told the truth.” His case was taken up by ACLU via ACT UP prison-activist Judy Greenspan and a significant amount of Rochman papers covers Greenspan’s media campaign and legal filings. Smith, who ultimately died in prison in 2003, was an ACT UP activist, black and gay. His case is viewed  as an early example of the compounding effects of race, class, sexual orientation and HIV status-indeed of HIV criminalization.

Not Sanitized for Your Protection: Diseased Pariah News and the Political Uses of Humor

This is a guest post by intern Harold Hardin, who is working on the NEH Grant-Funded Project The Bay Area’s Response to the AIDS Epidemic.

I came across recently a sardonic, humorously bizarre little zine in the Beowulf Thorne papers (GLBT Historical Society, 2003-10) called Diseased Pariah News (DPN). DPN was a zine created during the early 90’s that used gallows humor to humorously educate/entertain mostly gay (often white) cisgender men about HIV/AIDS among other gay men’s health issues. Humor is not something I would immediately associate with AIDS/HIV. Certainly, in the popular imagination AIDS and humor couldn’t be further apart. Queer white, cis, men living with HIV/AIDS in popular media depictions are generally akin to Tom Hanks in Philadelphia: a “noble, suffering AIDS victim”.

Further, many current LGBTQ media consumers tend to shy away from LGBTQ depictions that have overt internalized homophobia/transphobia, straying away from media depictions that might seem to make light of oppressive circumstances in ways that are ultimately self- cannibalizing. Rupaul was famously castigated for having content on her show that was deemed transphobic. Lisa Lampanelli, though not queer, is known for her gallows humor and recently left show business citing, “people in their 20s and 30s weren’t getting into that [insult comedy] tradition”. I spoke to a friend on Facebook about DPN and they echoed a popularly resonant sentiment, “I really don’t like to view historical media/works of art relating to our [queer] community. Because they always carry the hint of shame, of internalized homophobia and transphobia.”

 Clearly, we are currently living through a shift in what we find humorous from particular groups of people based on their identities.  And to be honest, it shouldn’t be ok for a white, cisgender, straight, man or woman to make jokes about communities that they historically (or contemporaneously, for that matter) oppress.  But should queer people with HIV/AIDS be able to laugh at their own lived experiences? If observational comedy is about illuminating the mundane and often untintentionally humorous aspects of our everyday lives then DPN represents to me a group of queers with HIV/AIDS taking this to its’ logical conclusion: finding humor in the everyday lives of queer folx living with HIV/AIDS. Additionally, I think something is foreclosed when we as a queer community rush to quash inter-group humor that may on its surface appear aberrant.  Queer people should be able to laugh at their own lived experiences if they so desire, especially, if by laughing, we find a form of resistance while skewering social and political realities that we ultimately find empowering.

New Archives Intern: Ganzolboo Ayurzana

Today’s post is an introduction from Ganzolboo Ayurzana, one of our current interns here in the Archives. Ganzolboo has actually been working with us for several months now, and he is helping us inventory born-digital collections materials which are currently stored with physical collections so that we can capture the data off of them before they become unreadable.


Hello, my name is Ganzolboo Ayurzana. I am a senior year student at San Francisco State University. I am currently pursuing a double major of computer and math. I am from Mongolia, and I came to this country in pursuit of greater knowledge and career. One thing interesting about me is that I am able to converse in 5 different languages — Mongolian, Korean, English, Japanese, and Russian. Ever since I was young I had a talent for picking up new languages faster than my peers. In my free time I like to play basketball, hang out with my friends, and write computer code. I am also a huge Marvel movie fan, and every movie that came out in theaters I would go watch at least twice; sometimes even thrice. I also love Harry Potter, and I have read the book and watched the movie enough times to know about it all inside out.

I am very much looking forward to getting to know this excellent group of people and learning more about what librarians do.